{
  "_id": "6a1edca9b401979e7340fdef",
  "Package": "SYNCSA",
  "Type": "Package",
  "Title": "Analysis of Functional and Phylogenetic Patterns in\nMetacommunities",
  "Version": "1.3.5",
  "Date": "2020-09-01",
  "Author": "Vanderlei Julio Debastiani",
  "Maintainer": "Vanderlei Julio Debastiani\n<vanderleidebastiani@yahoo.com.br>",
  "Description": "Analysis of metacommunities based on functional traits and\nphylogeny of the community components. The functions that are\noffered here implement for the R environment methods that have\nbeen available in the SYNCSA application written in C++ (by\nValerio Pillar, available at\n<http://ecoqua.ecologia.ufrgs.br/SYNCSA.html>).",
  "License": "GPL-2",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.1.1",
  "Collate": "'CollectNames.R' 'ProgressBAR.R' 'belonging.R' 'cent.norm.R'\n'coinertia.partial.syncsa.R' 'coinertia.syncsa.R'\n'cor.matrix.R' 'cor.matrix.bf.R' 'cor.matrix.partial.R'\n'cor.matrix.rao.R' 'matmult.syncsa.R' 'matrix.p.R' 'matrix.t.R'\n'matrix.w.transformation.R' 'matrix.x.R' 'optimal.R'\n'organize.syncsa.R' 'part.cor.R' 'pca.R' 'permut.row.matrix.R'\n'permut.vector.R' 'plot.pcasyncsa.R' 'print.optimal.R'\n'syncsa.R' 'print.syncsa.R' 'pro.matrix.R' 'pro.matrix.bf.R'\n'pro.matrix.partial.R' 'pro.matrix.rao.R' 'procrustes.syncsa.R'\n'procrustes.partial.syncsa.R' 'rao.diversity.R' 'rv.matrix.R'\n'rv.matrix.bf.R' 'rv.matrix.partial.R' 'rv.matrix.rao.R'\n'startup.R' 'syncsa.obs.R' 'var.dummy.R' 'var.type.R'",
  "Repository": "https://vanderleidebastiani.r-universe.dev",
  "Date/Publication": "2020-09-01 19:44:26 UTC",
  "RemoteUrl": "https://github.com/vanderleidebastiani/syncsa",
  "RemoteRef": "HEAD",
  "RemoteSha": "83622ced401714559059aa17895b224d6fb90510",
  "NeedsCompilation": "no",
  "Packaged": {
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    "User": "root"
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  "_user": "vanderleidebastiani",
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  "_published": "2026-06-02T13:37:45.905Z",
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    "author": "Vanderlei Debastiani <vanderleidebastiani@yahoo.com.br>",
    "committer": "Vanderlei Debastiani <vanderleidebastiani@yahoo.com.br>",
    "message": "Included optional gowdis options, correct the standardization in matrix X and include correlations using Beals smoothed community.\n",
    "time": 1598989466
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      "role": "Imports"
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    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
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    "extra/readme.md",
    "extra/SYNCSA.html",
    "manual.pdf"
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  "_realowner": "vanderleidebastiani",
  "_cranurl": true,
  "_releases": [
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      "date": "2011-05-25"
    },
    {
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      "date": "2011-07-23"
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      "date": "2020-01-09"
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    "cent.norm",
    "coinertia.partial.syncsa",
    "coinertia.syncsa",
    "CollectNames",
    "cor.matrix",
    "cor.matrix.bf",
    "cor.matrix.partial",
    "cor.matrix.rao",
    "matmult.syncsa",
    "matrix.p",
    "matrix.t",
    "matrix.w.transformation",
    "matrix.x",
    "optimal",
    "organize.syncsa",
    "part.cor",
    "pca",
    "permut.row.matrix",
    "permut.vector",
    "pro.matrix",
    "pro.matrix.bf",
    "pro.matrix.partial",
    "pro.matrix.rao",
    "procrustes.partial.syncsa",
    "procrustes.syncsa",
    "ProgressBAR",
    "rao.diversity",
    "rv.matrix",
    "rv.matrix.bf",
    "rv.matrix.partial",
    "rv.matrix.rao",
    "syncsa",
    "syncsa.obs",
    "var.dummy",
    "var.type"
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      "name": "ADRS",
      "title": "Artificial Data for Run SYNCSA",
      "object": "ADRS",
      "file": "ADRS.rda",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "flona",
      "title": "Hypothetical data for SYNCSA",
      "object": "flona",
      "file": "flona.rda",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "ADRS",
      "title": "Artificial Data for Run SYNCSA",
      "topics": [
        "ADRS"
      ]
    },
    {
      "page": "belonging",
      "title": "Degree of belonging of species",
      "topics": [
        "belonging"
      ]
    },
    {
      "page": "cent.norm",
      "title": "Matrix centralization and standardization",
      "topics": [
        "cent.norm"
      ]
    },
    {
      "page": "coinertia.syncsa",
      "title": "Co-inertia and Partial Co-inertia correlations.",
      "topics": [
        "coinertia.partial.syncsa",
        "coinertia.syncsa"
      ]
    },
    {
      "page": "CollectNames",
      "title": "Collect names an entire list",
      "topics": [
        "CollectNames"
      ]
    },
    {
      "page": "cor.matrix",
      "title": "Function to obtain the correlation between two matrices and partial matrix correlation between three matrices.",
      "topics": [
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        "cor.matrix.bf",
        "cor.matrix.partial",
        "cor.matrix.rao",
        "pro.matrix",
        "pro.matrix.bf",
        "pro.matrix.partial",
        "pro.matrix.rao",
        "rv.matrix",
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        "rv.matrix.partial",
        "rv.matrix.rao"
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      "page": "flona",
      "title": "Hypothetical data for SYNCSA",
      "topics": [
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      ]
    },
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      "page": "matmult.syncsa",
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      "topics": [
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      ]
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      "page": "matrix.p",
      "title": "Matrix P",
      "topics": [
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      "title": "Matrix T",
      "topics": [
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      ]
    },
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      "title": "Community data transformation",
      "topics": [
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      ]
    },
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      "page": "matrix.x",
      "title": "Matrix X",
      "topics": [
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      ]
    },
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      "title": "Searching for optimal traits",
      "topics": [
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        "print.optimal"
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      "title": "Function for organize data for Package SYNCSA",
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        "print.pcasyncsa"
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        "procrustes.syncsa"
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      "title": "SYNCSA",
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